BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015B07LP1|AL426794
(956 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig773 1181 0.0
>3x_Contig773
Length = 3107
Score = 1181 bits (595), Expect = 0.0
Identities = 614/619 (99%), Gaps = 1/619 (0%)
Strand = Plus / Minus
Query: 1 aatgtttcgatatatagaaagttctcaaaataagttatatttgtcgcatgttcacatatg 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 648 aatgtttcgatatatagaaagttctcaaaataagtaatatttgtcgcatgttcacatatg 589
Query: 61 agcccggtaaaccttgtcaataaattccgatttaaatgccaagtacagtgtatcttattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 agcccggtaaaccttgtcaataaattccgatttaaatgccaagtacagtgtatcttattt 529
Query: 121 attagcttgcaaagttcaacgttcttgcttagagtattgaatagcgcttgaaacttaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 attagcttgcaaagttcaacgttcttgcttagagtattgaatagcgcttgaaacttaact 469
Query: 181 gatgatcgccctgcttcagaaaacacaagcgtagaccagttgttgccaaaataaggatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gatgatcgccctgcttcagaaaacacaagcgtagaccagttgttgccaaaataaggatat 409
Query: 241 tctgggatgtgtataattggtctttcgttcaaatataggttttggtagagtgacgccact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tctgggatgtgtataattggtctttcgttcaaatataggttttggtagagtgacgccact 349
Query: 301 gttttatcgtaaagttggtgagataccatcatcaaggatgatttttcgatttgagataaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gttttatcgtaaagttggtgagataccatcatcaaggatgatttttcgatttgagataaa 289
Query: 361 tatcccagtatctcaagccatatttcgttcggaagctgttcgagcatttgtgctgttata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tatcccagtatctcaagccatatttcgttcggaagctgttcgagcatttgtgctgttata 229
Query: 421 ttagtgctgttttcatcaattgagtgcgttgttgcattccgtgtgcaaaag-ttaacaag 479
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 228 ttagtgctgttttcatcaattgagtgcgttgttgcattccgtgtgcaaaagattaacaag 169
Query: 480 cgtttcctgaggctaaggtagcatttgtattaattcatcagtagcttacaaatgattggc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 cgtttcctgaggctaaggtagcatttgtattaattcatcagtagcttacaaatgattggc 109
Query: 540 aatgtataagaatgtcacgtgagccaatgatatggttagtacgaatttcacaagaataaa 599
|||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 108 aatgtataagaatgtcacgtgagcgaatgatatggttagtacgaatttcacaataataaa 49
Query: 600 tatctagtccatattaccc 618
|||||| ||||||||||||
Sbjct: 48 tatctattccatattaccc 30
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,887
Number of Sequences: 1807
Number of extensions: 14887
Number of successful extensions: 159
Number of sequences better than 1.0e-20: 1
length of query: 956
length of database: 10,358,551
effective HSP length: 16
effective length of query: 940
effective length of database: 10,329,639
effective search space: 9709860660
effective search space used: 9709860660
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)